Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PAAD rs848308 chr1:16321901 A/G 1.97E-6 176 3.43 15.53 15.5 KM Plot
PAAD rs848310 chr1:16309073 A/G 2.01E-6 176 3.43 15.13 15.57 KM Plot
PAAD rs848312 chr1:16309856 C/T 2.03E-6 176 3.43 14 15.62 KM Plot
PAAD rs848313 chr1:16310183 C/T 2.03E-6 176 3.43 14 15.62 KM Plot
PAAD rs857317 chr6:44861801 G/A 8.88E-5 178 11.98 16.17 16.07 KM Plot
PAAD rs861897 chr1:16314559 T/C 2.03E-6 176 3.43 14 15.62 KM Plot
PAAD rs864240 chr1:16314269 A/G 2.03E-6 176 3.43 14 15.62 KM Plot
PAAD rs871090 chr17:6068727 C/T 1.04E-12 175 15.3 16.15 1.37 KM Plot
PAAD rs875131 chr4:2402885 T/C 0 178 0.4 16.1 15.37 KM Plot
PAAD rs875133 chr4:2403365 A/G 0 178 0.4 16.1 15.37 KM Plot
PAAD rs875134 chr4:2403271 G/C 0 178 0.4 16.1 15.37 KM Plot
PAAD rs880931 chr2:238396741 G/A 0.000158 176 15.2 19.87 4 KM Plot
PAAD rs891307 chr11:44616829 G/A 2.76E-6 172 4.77 15.93 15.4 KM Plot
PAAD rs896054 chr3:13583361 C/T 6.98E-5 178 16.03 15.33 3.9 KM Plot
PAAD rs905651 chr3:15554626 T/C 0.000155 178 15.95 10.12 20.35 KM Plot